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ISO 19115-2 Geographic Information - Metadata - Part 2: Extensions for Imagery and Gridded Data
ISO 19115-2:2009(E)
Water column bacteria data from ARSV Laurence M. Gould cruises LMG0104 and LMG0106 in the Southern Ocean in 2001 (SOGLOBEC project; Sea Ice Microbes project) (NCEI Accession 0112521)
2013-08-27
publication
2023-03-30
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0112521
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Chris H. Fritsen
University of Nevada; University of Nevada - Reno; Desert Research Institute (DRI)
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Fritsen, Chris H.
Desert Research Institute
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UNV - Reno Desert Research Institute website
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University of Nevada; University of Nevada - Reno; Desert Research Institute (DRI)
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This dataset contains biological data collected on ARSV Laurence M. Gould during cruises LMG0104 and LMG0106 in the South Pacific Ocean and Southern Ocean from 2001-04-29 to 2001-08-20. These data include bacterial abundance, bacterial carbon biomass, chl_a_ugm, and depth. The instruments used to collect these data include Niskin bottle. These data were collected by Dr Chris H. Fritsen of Desert Research Institute as part of the "GLOBEC: Sea Ice Microbial Communities (Sea Ice Microbes)" and "U.S. GLOBEC Southern Ocean (SOGLOBEC)" projects and "U.S. GLOBal ocean ECosystems dynamics (U.S. GLOBEC)" program. The Biological and Chemical Oceanography Data Management Office (BCO-DMO) submitted these data to NCEI on 2023-01-23.
The following is the text of the dataset description provided by BCO-DMO:
Water column bacteria data
Dataset Description:
Bacteria Abundance, Biomass and Chlorophyll: Water Column Samples a
BG 235 - Methods used for chlorophyll a (chla) analysis and bacteria biomass determination
Core Sampling techniques:
Sampling methods for recovery of chlorophyll a and bacteria from sea ice cores follows those described in
Garrison and Buck (1986)
Recommendations for reporting were used as outlined by: Horner, R. et al.,(1992)
Analytic Techniques:
Chla (mg m -3 ):
determined fluorometrically (Turner Designs 10AU Fluorometer) following extraction in 90% acetone (Parsons et al ., 1984) ice core chla corrected to account for chla in filtered sea water (FSW) added to core sections during melting
Bacteria cell abundance (cells m -3 ) and biomass (mg C m -3 ):
LMG 0106
preserved (0.5% glutaraldehyde) samples stained with 4',6-diamidino-2-phenylindole (DAPI; 0.1 to 0.3% final concentration), filtered through 0.2 mm black, polycarbonate membrane filters, and mounted onto glass microscope slides on the ship (within 24 hours following collection) bacteria enumerated using epifluorescence microscopy and sized using digital images taken with Image Pro Plus bacteria biomass determined using cell abundance, cell biovolume (BV; mm 3 ; as determined from mean length and width measurements), and an allometric conversion factor for bacterial carbon per volume specific for DAPI-stained bacteria (cellular carbon = 218 X BV 0.86 ; Loferer-Krossbacher et al. , 1998). ice core samples corrected for FSW dilution
NBP 0104
preserved (0.5% glutaraldehyde) samples stained with SYBR Gold (0.01% final concentration), filtered through 0.2 mm Anodisc filters (Whatman), and mounted onto glass microscope slides at home institution (~1-2 months following collection) bacteria enumerated using epifluorescence microscopy and sized using digital images taken with Image Pro Plus bacteria biomass determined using cell abundance, cell biovolume (BV; mm 3 ), and an allometric conversion factor for bacterial carbon per volume specific for Acridine Orange-stained bacteria (cellular carbon = 89.9 X BV 0.59 ; Simon and Azam, 1989). Note: an AO-specific carbon per volume conversion factor was used in calculating biomass in SYBR Gold-stained samples because both AO and SYBR Gold stain bacteria cells similarly relative to DAPI (unpublished data). ice core samples corrected for FSW dilution
Data from LMG0106 (July-August, 2001) added in June 2002.
Updated: April 21, 2006
This dataset is available to the public for a wide variety of uses including scientific research and analysis.
Funding provided by NSF Antarctic Sciences (NSF ANT) Award Number: ANT-9910098 Award URL: http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=9910098
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0112521
NCEI ACCESSION NUMBER
2023-01-23
publication
bacteria
BACTERIA - BACTERIAL DENSITY
CHLOROPHYLL A
DEPTH - OBSERVATION
SPONGE SPECIES IDENTIFICATION
theme
NODC DATA TYPES THESAURUS
bottle
instrument
NODC INSTRUMENT TYPES THESAURUS
biological
theme
NODC OBSERVATION TYPES THESAURUS
R/V Laurence M. Gould
platform
NODC PLATFORM NAMES THESAURUS
University of Nevada; University of Nevada - Reno; Desert Research Institute
dataCentre
NODC COLLECTING INSTITUTION NAMES THESAURUS
Biological and Chemical Oceanography Data Management Office
dataCentre
NODC SUBMITTING INSTITUTION NAMES THESAURUS
GLOBal Ocean ECosystems Dynamics (US GLOBEC)
Southern Ocean GLOBEC (SO-GLOBEC)
project
NODC PROJECT NAMES THESAURUS
South Pacific Ocean
Southern Ocean
place
NODC SEA AREA NAMES THESAURUS
oceanography
theme
WMO_CategoryCode
2012-09-15
publication
BCO-DMO > Biological and Chemical Oceanography Data Management Office
DOC/NOAA/NESDIS/NODC > National Oceanographic Data Center, NESDIS, NOAA, U.S. Department of Commerce
DRI > Desert Research Institute
dataCentre
Global Change Master Directory (GCMD) Data Center Keywords
2023
revision
17
Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA)
Greenbelt
MD
https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
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GCMD Keyword Forum Page
Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 17. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords
information
custodian
U.S. GLOBal ocean ECosystems dynamics (U.S. GLOBEC)
project
BCO-DMO Standard Programs
GLOBEC: Sea Ice Microbial Communities (Sea Ice Microbes)
U.S. GLOBEC Southern Ocean (SOGLOBEC)
project
BCO-DMO Standard Projects
GLOBEC > Global Ocean Ecosystem Dynamics, IGBP
U.S.GLOBEC-SO > U.S. Global Ocean Ecosystem Dynamics, Southern Ocean
project
Global Change Master Directory (GCMD) Project Keywords
2023
revision
17
Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA)
Greenbelt
MD
https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
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GCMD Keyword Forum Page
Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 17. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords
information
custodian
LMG0104
LMG0106
project
Provider Cruise IDs
Funding provided by NSF Antarctic Sciences (NSF ANT) Award Number: ANT-9910098
project
Provider Funding Award Information
bacterial abundance
bacterial carbon biomass
chl_a_ugm
cruise id
day_gmt
depth
event
latitude
longitude
month_gmt
station
year
theme
BCO-DMO Standard Parameters
EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > ANIMALS/INVERTEBRATES > SPONGES
EARTH SCIENCE > BIOLOGICAL CLASSIFICATION > BACTERIA/ARCHAEA
EARTH SCIENCE > OCEANS > OCEAN CHEMISTRY > CHLOROPHYLL
theme
Global Change Master Directory (GCMD) Science Keywords
2023
revision
17
Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA)
Greenbelt
MD
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GCMD Keyword Forum Page
Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 17. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords
information
custodian
bact_abun
bact_biomass_C
chl_a_ugm
cruiseid
day_gmt
depth
event
lat
lon
month_gmt
station
year
theme
Originator Parameter Names
Niskin bottle
instrument
BCO-DMO Standard Instruments
Niskin Bottle
instrument
Originator Instrument Names
ARSV Laurence M. Gould
platform
BCO-DMO Platform Names
Ships
platform
Global Change Master Directory (GCMD) Platform Keywords
2023
revision
17
Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA)
Greenbelt
MD
https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
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GCMD Keyword Forum Page
Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 17. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords
information
custodian
LAURENCE M. GOULD (call sign: WCX7445, ICES code: 33LG, 1998)
platform
ICES/SeaDataNet Ship Codes
OCEAN > PACIFIC OCEAN > SOUTH PACIFIC OCEAN
OCEAN > SOUTHERN OCEAN
place
Global Change Master Directory (GCMD) Location Keywords
2023
revision
17
Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA)
Greenbelt
MD
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information
custodian
Southern Ocean
place
Provider Place Names
accessLevel: Public
otherRestrictions
Cite as: Fritsen, Chris H. (2013). Water column bacteria data from ARSV Laurence M. Gould cruises LMG0104 and LMG0106 in the Southern Ocean in 2001 (SOGLOBEC project; Sea Ice Microbes project) (NCEI Accession 0112521). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0112521. Accessed [date].
Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives.
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Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose.
license
This dataset is licensed under a Creative Commons Attribution 4.0 International (CC BY 4.0) License.
SPDX License: Creative Commons Attribution 4.0 International (CC-BY-4.0)
Biological, chemical, physical, biogeochemical, ecological, environmental and other data collected from around the world during historical and contemporary periods of biological and chemical oceanographic exploration and research managed and submitted by the Biological and Chemical Oceanography Data Management Office (BCO-DMO)
2009-12-01
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Fritsen, C. H. (2002) Water column bacteria data from ARSV Laurence M. Gould cruises LMG0104 and LMG0106 in the Southern Ocean in 2001 (SOGLOBEC project; Sea Ice Microbes project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). Dataset version 2002-11-15. https://doi.org/10.1575/1912/bco-dmo.2350.1
2002-11-15
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https://doi.org/10.1575/1912/bco-dmo.2350.1
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Chris H. Fritsen
University of Nevada; University of Nevada - Reno; Desert Research Institute (DRI)
http://lod.bco-dmo.org/id/person/50502
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UNV - Reno Desert Research Institute website
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Biological and Chemical Oceanography Data Management Office (BCO-DMO)
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Fritsen, Chris H.
Desert Research Institute
http://lod.bco-dmo.org/id/person/50502
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Biological and Chemical Oceanography Data Management Office (BCO-DMO)
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crossReference
collection
eng; USA
utf8
environment
oceans
biota
-72.427
-67.049
-69.888
-65.965
2001-04-29
2001-08-20
Acquisition Description:
# Bacteria data from Southern Ocean GLOBEC # C. Fritsen and F. Stewart # * BactAbun = bacterial abundance = cells m-3 # * BactBio = bacterial biomass = mg C m-3 = ug C l-1 # * chla = mg chla m-3 = ug chla l-1
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NCEI Accession 0112521 v1.1 was published.
2013-08-27T13:46:09Z
NCEI Accession 0112521 v1.1
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NCEI Accession 0112521 v1.1
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NCEI Accession 0112521 was revised and v2.2 was published.
Updates were received for this dataset. These updates were copied into the data/0-data/ directory of this accession. These updates may provide additional files or replace obsolete files. This version contains the most complete and up-to-date representation of this archival information package. All of the files received prior to this update are available in the preceding version of this accession.
2013-08-29T13:46:11Z
NCEI Accession 0112521 v2.2
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NCEI Accession 0112521 v2.2
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NCEI Accession 0112521 was revised and v3.3 was published.
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2023-03-30T17:20:28Z
NCEI Accession 0112521 v3.3
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NCEI Accession 0112521 v3.3
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NOAA National Centers for Environmental Information
NOAA created the National Centers for Environmental Information (NCEI) by merging NOAA's National Climatic Data Center (NCDC), National Geophysical Data Center (NGDC), and National Oceanographic Data Center (NODC), including the National Coastal Data Development Center (NCDDC), per the Consolidated and Further Continuing Appropriations Act, 2015, Public Law 113-235. NCEI launched publicly on April 22, 2015.
2015-04-22T00:00:00
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NCEI Accession 0112521 was revised and a new version of the archival package was published. Updates to existing archival packages may provide additional files or replace obsolete files. The latest version contains the most complete and up-to-date representation of this archival information package. All of the files received prior to this update are available in the preceding version of this accession. Please see journal.txt in the /about directory for additional details on changes made.
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custodian
bottle
bottle
any type of water bottle sampling device
Generic name for water collection device; usually used to determine temperature, salinity and provide water aliquots for measurement of a wide range of parameters; often referred to by a specific type of water sampling bottle, such as a Nansen or Niskin bottle.
R/V Laurence M. Gould
Flag: United States of America
Vessel Type: Research Vessel; Ice Breaker
DOB: Dec 1997
IMO: 9137337
The RV Laurence M. Gould is an icebreaker used by researchers from the United States' National Science Foundation for research in the Southern Ocean. The vessel is named after Laurence McKinley Gould a widely recognized American scientist, who had explored both the Arctic and Antarctic. She was built in Louisiana to replace the RV Polar Duke.