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National Coral Reef Monitoring Program: Benthic Cover Derived from Analysis of Benthic Images Collected for Climate Stations across the Pacific Remote Island Areas from 2015-01-26 to 2015-04-27 (NCEI Accession 0159152)


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            title:  National Coral Reef Monitoring Program: Benthic Cover Derived from Analysis of Benthic Images Collected for Climate Stations across the Pacific Remote Island Areas from 2015-01-26 to 2015-04-27 (NCEI Accession 0159152)
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        abstract:  The data described here result from benthic photo-quadrat surveys conducted along transects at climate stations and permanent sites identified by the Ocean and Climate Change team across the Pacific Remote Island Areas since 2014. Benthic habitat imagery were quantitatively analyzed using Coral Point Count with Excel extensions (CPCe; Kohler and Gill, 2006) software from 2010-2014 and a web-based annotation tool called CoralNet (Beijbom et al. 2016) from 2015 to present. In general, images are analyzed to produce three functional group levels of benthic cover: Tier 1 (e.g., hard coral, soft coral, macroalgae, turf algae, etc.), Tier 2 (e.g., Hard Coral = massive, branching, foliose, encrusting, etc.; Macroalgae = upright macroalgae, encrusting macroalgae, bluegreen macroalgae, and Halimeda, etc.), and Tier 3 (e.g., Hard Coral = Astreopora sp, Favia sp, Pocillopora, etc.; Macroalgae = Caulerpa sp, Dictyosphaeria sp, Padina sp, etc.). Climate stations are 3-4 sites per island that were selected in a stratified random fashion to be roughly equally spaced around the island, along the 15 m contour, on hard bottom, and at least 1 km away from a river mouth or embayment. Once selected we assess multiple features of the coral reef environment including in-situ temperature (STR), seawater carbonate, net carbonate accretion (CAU), bioerosion (BMU), and cryptobiota diversity (ARMS).
        purpose:  The NOAA National Coral Reef Monitoring Program (NCRMP) details a long term approach to provide an ecosystem perspective via monitoring climate, fish, benthic, and socioeconomic variables in a consistent and integrated manner. The NCRMP is intended to coordinate various NOAA Coral Reef Conservation Program (CRCP) biological, physical, and human dimensions activities into a cohesive NOAA-wide effort. Through the implementation of the NCRMP, NOAA will be able to clearly and concisely communicate results of national-scale monitoring to national, state, and territorial policy makers, resource managers, and the public on a periodic basis. To support a long-term Coral Reef Conservation Program for sustainable management and conservation of coral reef ecosystems and the NOAA Ocean Acidification Program (OAP), total alkalinity and dissolved inorganic carbon are measured to calculate various inorganic carbon system parameters that influence coral reef ecosystems monitored by the NOAA Coral Reef Ecosystem Program (CREP). SCUBA divers take discrete water samples at the benthos and at the surface at forereef study sites established by the ongoing Pacific Reef Assessment and Monitoring Program (RAMP).
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                title:  Coral Point Count with Excel extensions (CPCe): A Visual Basic program for the determination of coral and substrate coverage using random point count methodology
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                title:  Towards automated annotation of benthic survey images: variability of human experts and operational modes of automation
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                        citedResponsibleParty:  (CI_ResponsibleParty)
                            individualName: (inapplicable)
                            contactInfo:  (CI_Contact)
                                onlineResource:  (CI_OnlineResource)
                                    linkage: https://www.ncei.noaa.gov/archive/accession/0159152/1.1
                                    protocol:  HTTPS
                                    name:  NCEI Accession 0159152 v1.1
                                    description:  published 2017-02-06T22:22:08Z
                                    function:  (CI_OnLineFunctionCode) download
                            role: (inapplicable)
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    dataQualityInfo:  (DQ_DataQuality)
        scope:  (DQ_Scope)
            level:  (MD_ScopeCode) dataset
        lineage:  (LI_Lineage)
            processStep:  (LE_ProcessStep)
                description:  Data Type: REEF AND/OR BOTTOM REGIME - PERCENT COVER (measured); Units: percent; Observation Type: laboratory analysis; Sampling Instrument: laboratory analysis.
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    metadataMaintenance:  (MD_MaintenanceInformation)
        maintenanceAndUpdateFrequency:  (MD_MaintenanceFrequencyCode) asNeeded
        maintenanceNote:  Metadata are developed, maintained and distributed by NCEI. Updates are performed as needed to maintain currentness.
        contact:  (CI_ResponsibleParty)
            organisationName:  NOAA National Centers for Environmental Information
            role:  (CI_RoleCode) custodian
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    acquisitionInformation:  (MI_AcquisitionInformation)
        platform:  (MI_Platform)
            identifier:  (MD_Identifier)
                code:  NOAA Ship Hi'ialakai
            description:  Title: NOAA Ship Flag: United States of America Vessel Type: Research Vessel DOB: Nov 1984 IMO: 8835619 Hull No: R 334 Former Name: Vindicator (2004) Commissioned by NOAA in 2002 Submitted to ICES on 2012-12-13.
            instrument: (missing)