*****************************************************************
Journal for accession number:  0002602
Created on:                    2006-03-14 13:12:18 -0500
By:                            Francis Mitchell,SSMC3 4637,7133272 113

Source:  These data from Dr. Steven Coles were forwarded to NODC via ftp
by Patrick Caldwell, NODC Liaison Officaer at the University of Hawaii.

Action(s): These data were uncompressed and copied to subdirectory data/0-data.

October 2009 update:  The data are also listed in the NOAA Coral Reef Information
System (CoRIS). Federal Geographic Data Committe metadata
was downloaded and added to the "about" folder for these data as the
updated metadata contains International Organization for Standardization
(ISO) keywords.

November 2009 - an ASCII .CSV copy of the file Manta_Survey_Data.xls was
generated and placed in the 1-data directory.  This file was generated to 
replace the .csv copy not included in the original data set.

September 2014 - PDF/A copies were made of all Microsoft Excel worksheets and
spreadsheets and placed in the 1-data directory. Additionally, ASCII .csv
copies of RemovalSumary.xls from /Photoquadrats/Quadrat_7/ were made and
placed in 1-data/Photoquadrats/Quadrat_7. ASCII .csv copies of
/SpongeGrowth/GrowthData.xls were created and placed in
1-data/SpongeGrowth/.

Files:
about/
This directory contains files generated by NODC with ancillary information
about the data submission.

0002602_lonlat.txt - Contains sample locations for these data.  Each row
                     contains the geographical position where these data were
                     collected (longitude in the left column and latitude in
                     the right column, both in degrees).  NODC may have
                     corrected geographic positions that seemed to be in error
                     when generating this file.  However, NODC did not change
                     the original data files under the directory data/0-data/.

0002602_map.jpg - Sample location map for these data.

location_plot.txt - description of NODC process to generate geographic map file.

0-email.txt - Email from NODC liaison requesting that the data be archived at
          NODC.

colesMycalefgdc.txt - Federal Geographic Data Committee (FGDC) metadata documentation
            for the data set.

FGDC_meta_nodc_0002602_ISO_keywords.txt - Duplicate FGDC metadata downloaded 
from the NOAA Coral Reef Information System (CoRIS) which has International 
Organization for Standardization (ISO) keywords and additional reef keywords 
added to the metadata.

hcriY1sponge.txt - simple text version of metadata for this accesssion.

 
data/0-data/
This directory contains the data and metadata files as submitted to NODC.

FILENAME                     DESCRIPTION
HCRI_Report.pdf              Original Report provided as PDF.
HCRI_Report.txt              redundant ASCII copy
Figure01_02.jpg              Map of manta board survey locations

Data are in the following directories.  The originals were provided as
MS Excel spreadsheets.  Redundant ASCII CSV-format copies were made, with
each unique sheet getting a unique file.  

data/0-data/MantaSurveys
Manta_Board_GPS_Data.xls     Coordinates of stations
Manta_Board_GPS_Data.csv     ASCII CSV copy
Manta_Survey_Data.xls        survey data


data/0-data/Photoquadrats
ControlsSummary.xls          Summary of data from Control
ControlsSummaryQuarter1.csv  ASCII CSV copies of spreadsheets
ControlsSummaryQuarter2.csv  ASCII CSV copies of spreadsheets
ControlsSummaryQuarter3.csv  ASCII CSV copies of spreadsheets
ControlsSummaryQuarter4.csv  ASCII CSV copies of spreadsheets
ControlsSummaryYear.csv      ASCII CSV copies of spreadsheets

RemovalsSummary.xls          Removal Summary Data
RemovalsSummaryAllData.csv   ASCII CSV copies of spreadsheets
RemovalsSummaryQuarter1.csv  ASCII CSV copies of spreadsheets
RemovalsSummaryQuarter2.csv  ASCII CSV copies of spreadsheets
RemovalsSummaryQuarter3.csv  ASCII CSV copies of spreadsheets
RemovalsSummaryQuarter4.csv  ASCII CSV copies of spreadsheets
RemovalsSummaryRemovals.csv  ASCII CSV copies of spreadsheets
RemovalsSummaryYear.csv      ASCII CSV copies of spreadsheets

TimeSeries.xls               Change in time of control and removal quadrats
TimeSeriesSheet1.csv         ASCII CSV copy

Directories within /Photogradrats
Each directory pertains to a given quadrat.  In each, a ControlSummary 
and a RemovalSummary (*.xls) file is provided, which has been dumped into 
redundant ASCII CSV files for each sheet of each spreadsheet.  The sheets
hold the raw and the summary data.

Quadrat_1/
Quadrat_2/
Quadrat_3/
Quadrat_4/
Quadrat_5/
Quadrat_6/
Quadrat_7/
Quadrat_8/
Quadrat_9/
Quadrat10/

data/0-data/SpongeGrowth
GrowthData.xls                   Growth analysis data 
GrowthData_Form.csv              ASCII CSV copy
GrowthData_Q1.csv                ASCII CSV copy
GrowthData_Q2.csv                ASCII CSV copy
GrowthData_Q3.csv                ASCII CSV copy
GrowthData_Q4.csv                ASCII CSV copy
GrowthData_TimeSeries.csv        ASCII CSV copy
GrowthData_year.csv              ASCII CSV copy

data/0-data/TransectData
Photo_Transect_Data.xls          Data from photo transects
Photo_Transect_Data.csv          ASCII CSV copy
Photo_Transect_GPS_Data.xls      Coordinates and dates
Photo_Transect_GPS_Data.csv      ASCII CSV copy
TransectSummaries.xls            Transect summary data
TransectSummaries_Data.csv       ASCII CSV copy
TransectSummaries_Sheet2.csv     ASCII CSV copy

Directories in data/0-data/TransectData
(each directory pertains to a given location.  The directory name includes
the location, date, and depth (not all).  In each, a summary file (*.xls)
is provided, which has been dumped into redundant ASCII CSV files for each 
sheet of each spreadsheet.  The sheets hold the raw and the summary data).

Directories 05-17-04Reef4, 01-07-05Reef4-1.8m, and 05-17-04Reef4 contain photo
and transect .jpg data image files.

data/0-data/TransectData/01-07-05Reef3-2.4m
data/0-data/TransectData/01-07-05Reef4-1.8m
data/0-data/TransectData/01-14-05Reef1-2m
data/0-data/TransectData/01-14-05Reef5-2.5m
data/0-data/TransectData/01-14-05Reef7-1.8m
data/0-data/TransectData/01-21-05Reef0_MCBH3m
data/0-data/TransectData/01-28-05Reef10_3m
data/0-data/TransectData/01-28-05Reef26_2.4m
data/0-data/TransectData/02-19-04CocoIs1
data/0-data/TransectData/05-05-04HeeiaReef17
data/0-data/TransectData/05-05-04WaiaholeReef44
data/0-data/TransectData/05-10-04HakipuuReef
data/0-data/TransectData/05-10-04KPristineReef42
data/0-data/TransectData/05-10-043PolesReef24
data/0-data/TransectData/05-17-04CheckerReef8
data/0-data/TransectData/05-17-04Marke18Reef25
data/0-data/TransectData/05-17-04Reef4
data/0-data/TransectData/09-29-04ReefATransects
data/0-data/TransectData/10-01-04CocoIs2Transects
data/0-data/TransectData/12-15-04HIMBDockTransects

data/1-data/
This directory contains files that were converted by NODC from their
originally submitted format under the 0-data/ directory to an archival format.

Copy_of_Manta_Survey_Data.csv - ASCII .CSV version of Manta_Survey_Data.xls 
generated at the NODC. 

*.csv- Comma-separated-value (CSV) files that NODC converted from Microsoft
Excel files in 0-data/. There is one CSV file for each Excel spreadsheet. For
multi-spreadsheet files, the sheet name is appended to the file basename,
separated by a dash (-).

*.pdf - Portable Document Format (PDF) files that NODC converted from
Microsoft Excel files in 0-data/. There is one PDF file for each Excel
spreadsheet. For multi-spreadsheet files, the sheet name is appended to the
file basename, separated by a dash (-).
   


