*****************************************************************
Journal for accession number: 0157633
Created on:                    2018-02-13 22:06:23 UTC
By:                            Zachary T. Mason, National Centers for Environmental Information

Source: These files were provided by CRCP and sent through Google Drive. Additional files
  were provided as email attachments. New files in version 7.7 were provided as part of 
  S2N package EHWLNN.

Actions: Documents shared through Google Drive were downloaded and copied into the
   0-data directory. Documents provided through email were downloaded and copied into
   the 0-data directory. Dcouments provided through S2N were copied into the 0-data/Atlantic
   directory. All files in the 0-data/Atlantic directory were organized based on instructions
   included as part of the S2N submission EHWLNN.

Version 2.2 - In this version of NCEI Accession 0157633, the 2016 Ecological Monitoring report and
  coral demographic lists were added to the accession.

Version 3.3 - In this version of NCEI Accession 0157633, the Calcification Accretion Unit SOPs were
  added to the accession under the Pacific/Climate directory.

Version 4.4 - In this version of NCEI Accession 0157633, the 2016 Benthic Summary reports were
  added to the accession.

Version 5.5 - In this Version of NCEI Accession 0157633, the Guide_all_in_one.pdf and 
  dic_sample_technique_revised_5-17-10.pdf files were added to this accession under the 
  Pacific/Climate directory.   

Version 6.6 - In this version of NCEI accession 0157633 the Atlantic/ directory and three
  protocols documents were added to this accession.  The four protocols documents are 
  Collector_instructions.pdf, NCRMP_Benthic_Assessment_Protocol_09062017.pdf, 
  NCRMP_Coral_Demographic_Protocol_09062017.pdf, and NCRMP_RVC_Protocol_2017.pdf.  

Version 7.7 - In this version of NCEI accession 0157633 the following files were added under 
  the Atlantic/ directory: NCRMP_Protocol_Benthic_CoralDemographic_2016. pdf, 
  NCRMP_Protocol_Benthic_LinePointIntercept_2016.pdf, NCRMP_Protocol_Benthic_TopographicComplexity_2016.pdf
  NCRMP_Protocol_Fish_RVC_2016.pdf, NCRMP_Protocol_SampleFrame Protocol_2016.pdf
  

Files:
about/
This directory contains files created by NCEI staff, email correspondence,
and other 'negotiable' information between NCEI staff and the data provider.

0-email.txt - 
  Follow up email from phone discussion with the data submitter where he shared documents through 
  Google Drive to add to the documents only accession to support related NCRMP data archival
  packages.

1-emai.txt -
  Email from the data provider submtting additional reports.

2-emai.txt -
  Email from the data provider submtting SOPs for the Calcification Accretion Units.

3-email.txt -
  Email from the data provider submtting 2016 Benthic Summary Reports

4-email.txt -
  Email from the data provider submitting additional reports. 

EHWLNN-confirmation_email.txt
  Email from the Send2NCEI web application to NCCOS Data Manager confirming 
  that NCEI has received the submission. Text file contains submitter notes from
  S2N package EHWLNN.

data/0-data/
This directory contains the data files as submitted to NCEI.

data/0-data/Atlantic/Biological/Caribbean_Gulf-of-Mexico Biological
This directory contains documents related to the Atlantic-Caribbean_Gulf-of-Mexico Biological component of
the National Coral Reef Monitoring Program. 

NCRMP_Protocol_Benthic_CoralDemographic_2016.pdf
  Coral Demographics Survey Protocol for the Atlantic, U.S. Caribbean and Gulf of Mexico: 2016 
  (revised 17 May 2016)

NCRMP_Protocol_Benthic_LinePointIntercept_2016.pdf
  Line Point-Intercept (LPI) Survey Protocol for the Atlantic, U.S. Caribbean and Gulf of 
  Mexico: 2016 (revised 19 May 2016)

NCRMP_Protocol_Benthic_TopographicComplexity_2016.pdf
  Topographic Complexity Survey Protocol for the Atlantic, U.S. Caribbean and Flower Garden 
  Banks National Marine Sanctuary: 2016 (revised 17 May 2016)

NCRMP_Protocol_Fish_RVC_2016.pdf
  Reef Visual Census (RVC) Fish Survey Protocol for Atlantic, U.S. Caribbean and Gulf of 
  Mexico (revised 19 May 2016)

NCRMP_Protocol_SampleFrame Protocol_2016.pdf
  NCRMP Sample Frame Development Protocols for U.S. Caribbean and FGBNMS (revised January 2018)

data/0-data/Atlantic/Biological/Florida
This directory contains documents related to the Atlantic-Florida Biological component of
the National Coral Reef Monitoring Program. 

Collector_instructions.pdf -
  This document contains step by step instructions on how to properly use the 
  "collector" application for both Android and IOS operating systems.

NCRMP_Benthic_Assessment_Protocol_09062017.pdf -
  This document contains the National Coral Reef Monitoring Program's Benthic Assessment
  Protocols for the U.S. Carribbean and Gulf of Mexico.  This version was revised on April
  24, 2017.

NCRMP_Coral_Demographic_Protocol_09062017.pdf -
  This document contains the NCRMP Coral Demographics Survey Protocol for the U.S. Caribbean 
  and Gulf of Mexico.  It was updated on the 24th of April, 2017.

NCRMP_RVC_Protocol_2017.pdf -
  This document contains the NCRMP Reef Visual Census (RVC) Fish Survey Protocol for the
  U.S. Carribbean and the Gulf of Mexico.  This document was revised on May 23, 2017.

data/0-data/Pacific/Biological
This directory contains documents related to the Pacific Biological component of
the National Coral Reef Monitoring Program.

coral_demographic_lists/
This directory contains lists of coral genera and coral species surveyed. The directory also
contains lists of taxa surveyed for presence / absence.

benthic_summary_reports/
   DR-17-005.pdf
     Pacific Reef Assessment and Monitoring Program. 2017. Benthic REA monitoring summary: Northwestern Hawaiian 
     Islands 2016. Pacific Islands Fisheries Science Center. PIFSC Data Monitoring Report DR-17-005, 3 pp.

   DR-17-006.pdf
     Pacific Reef Assessment and Monitoring Program. 2017. Benthic REA monitoring summary: Jarvis Island 2016. 
     Pacific Islands Fisheries Science Center. PIFSC Data Monitoring Report DR-17-006, 3 pp.

   DR-17-007.pdf
     Pacific Reef Assessment and Monitoring Program. 2017. Benthic REA monitoring summary: Rose Atoll 2016. 
     Pacific Islands Fisheries Science Center. PIFSC Data Monitoring Report DR-17-007, 3 pp.

   DR-17-008.pdf
     Pacific Reef Assessment and Monitoring Program. 2017. Benthic REA monitoring summary: Main Hawaiian Islands 
     2016. Pacific Islands Fisheries Science Center. PIFSC Data Monitoring Report DR-17-008, 3 pp.

CREP_fish_2016.pdf
  McCoy, K., Heenan, A., Asher, J., Ayotte, P., Gorospe, K., Gray, A., Lino, K., Zamzow, J.,
  Williams, I. 2017. Pacific Reef Assessment and Monitoring Program. Data report: ecological 
  monitoring 2016: reef fishes and benthic habitats of the main Hawaiian Islands, Northwestern 
  Hawaiian Islands, Pacific Remote Island Areas, and American Samoa. Pacific Islands Fisheries Science Center. 
  PIFSC data report DR-17-001, 66 pp.

DR-14-003.pdf
  Heenan, Adel, Ayotte, Paula, Gray, Andrew Elisha, Lino, Kevin, McCoy, Kaylyn, Zamzow, Jill P.,
  Williams, Ivor D. 2014. Pacific Reef Assessment and Monitoring Program. Data report: ecological 
  monitoring 2012-2013: reef fishes and benthic habitats of the main Hawaiian Islands, American Samoa, 
  and Pacific Remote Island Areas. Pacific Islands Fisheries Science Center. 
  PIFSC data report DR-14-003, 112 pp. http://dx.doi.org/10.7289/V55H7D81

DR-15-001.pdf
  Heenan, Adel, McCoy, Kaylyn, Asher, Jacob Marcus, Ayotte, Paula, Gorospe, Kelvin, Gray, Andrew Elisha, 
  Lino, Kevin, Zamzow, Jill P., Williams, Ivor D. 2015. Pacific Reef Assessment and Monitoring Program. Data report: 
  ecological monitoring 2014: stationary point count surveys of reef fishes and benthic habitats of the Northwestern Hawaiian 
  Islands, Mariana Islands, and Wake Atoll. Pacific Islands Fisheries Science Center.  PIFSC data report DR-15-001, 101 pp. 
  http://dx.doi.org/10.7289/V5GT5K6B

DR-16-002.pdf
  K. McCoy, A. Heenan, J. Asher, P. Ayotte, K. Gorospe, A. Gray, K. Lino, J. Zamzow, and I. Williams. 2016. 
  Pacific Reef Assessment and Monitoring Program. Data report : ecological monitoring 2015 : reef fishes and benthic habitats 
  of the main Hawaiian Islands, Northwestern Hawaiian Islands, Pacific Remote Island Areas, and American Samoa. Pacific 
  Islands Fisheries Science Center.  PIFSC data report DR-16-002, 94 pp. http://dx.doi.org/10.7289/V5G73BQJ

DR-16-007.pdf (this document is also available in the Pacific Climate directory)
  Pacific Islands Fisheries Science Center, Coral Reef Ecosystem Program. Summary report of baseline surveys and installations 
  conducted in 2015 in the National Marine Sanctuary of American Samoa Pacific Islands Fisheries Science Center.  PIFSC data 
  report DR-16-007, 247 pp. http://dx.doi.org/10.7289/V5G73BQJ

PIFSC_Admin_Rep_15-07.pdf
  Ayotte, P., K. McCoy, A. Heenan, I. Williams, and J. Zamzow. 2015. 
  Coral reef ecosystem program standard operating procedures: data 
  collection for rapid ecological assessment fish surveys. Pacific Islands Fish. 
  Sci. Cent., Natl. Mar. Fish. Serv., NOAA, Honolulu, HI 96818-5007. Pacific Islands 
  Fish. Sci. Cent. Admin. Rep. H-1507, 33p. http://dx.doi.org/10.7289/V5SN06ZT

Pacific/Climate

This directory contains documents related to the Pacific Climate component of
the National Coral Reef Monitoring Program.

Guide_all_in_one.pdf -
  Dickson, A.G., Sabine, C.L. and Christian, J.R. (Eds.) 2007. Guide to best practices for ocean CO2 measurements.  PICES Special 
  Publication 3, 191 pp.  This document is a handbook and a guide for the methods of analyzing the parameters of carbon dioxide 
  in sea water.  This version of the guide contains information on the chemistry of carbon dioxide in sea water and the 
  methodology of determining carbon system parameters. 

dic_sample_technique_revised_5-17-10.pdf -
  Simone Alin. 2010.  Inorganic Carbon Sampling: Planning and Sample Collection.  This document contains methodology for 
  inorganic carbon analyses.  This version was created on May 14, 2010.

DR-16-007.pdf (this document is also available in the Pacific Biological directory)
  Pacific Islands Fisheries Science Center, Coral Reef Ecosystem Program. Summary report of baseline surveys and installations 
  conducted in 2015 in the National Marine Sanctuary of American Samoa Pacific Islands Fisheries Science Center.  PIFSC data 
  report DR-16-007, 247 pp. http://dx.doi.org/10.7289/V5G73BQJ

CAU1_Assembly_Deployment_Recovery_CRED_SOP2015.pdf 
  Calcification Accretion Unit (CAU) Assembly, Deployment, & Recovery SOP 2015

CAU2_Sample Processing_CRED_SOP_2015.pdf
  CAU Laboratory Analysis SOP (September 2015)
